Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos |
| Phenotype | phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos |
| Upregulated in class | BT_ATM_minus |
| GeneSet | NCI_HIV-1 NEF: NEGATIVE EFFECTOR OF FAS AND TNF-ALPHA |
| Enrichment Score (ES) | -0.69574744 |
| Normalized Enrichment Score (NES) | -1.8786911 |
| Nominal p-value | 0.001968504 |
| FDR q-value | 0.038464252 |
| FWER p-Value | 0.076 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | CYCS | 1422484_at 1445484_at | 326 | 1.941 | 0.0383 | No | ||
| 2 | BID | 1417045_at 1447873_x_at 1448560_at | 401 | 1.814 | 0.0847 | No | ||
| 3 | NFKBIA | 1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at | 2151 | 0.670 | 0.0232 | No | ||
| 4 | CASP8 | 1424552_at | 2154 | 0.670 | 0.0414 | No | ||
| 5 | TNF | 1419607_at | 6279 | 0.215 | -0.1410 | No | ||
| 6 | CHUK | 1417091_at 1428210_s_at 1451383_a_at | 7004 | 0.182 | -0.1690 | No | ||
| 7 | CASP3 | 1426165_a_at 1430192_at 1449839_at | 9953 | 0.073 | -0.3016 | No | ||
| 8 | BCL2 | 1422938_at 1427818_at 1437122_at 1440770_at 1443837_x_at 1457687_at | 10594 | 0.051 | -0.3295 | No | ||
| 9 | FASLG | 1418803_a_at 1449235_at | 10804 | 0.043 | -0.3378 | No | ||
| 10 | NFKB1 | 1427705_a_at 1442949_at | 11030 | 0.036 | -0.3471 | No | ||
| 11 | RIPK1 | 1419508_at 1439273_at 1449485_at | 12198 | -0.004 | -0.4003 | No | ||
| 12 | CRADD | 1427505_a_at 1443430_at | 12995 | -0.034 | -0.4357 | No | ||
| 13 | MAPK8 | 1420931_at 1420932_at 1437045_at 1440856_at 1457936_at | 16000 | -0.170 | -0.5682 | No | ||
| 14 | TRADD | 1429117_at 1439910_a_at 1452622_a_at | 16358 | -0.193 | -0.5793 | No | ||
| 15 | BIRC3 | 1421392_a_at 1425223_at | 16666 | -0.214 | -0.5874 | No | ||
| 16 | DAXX | 1419026_at | 16816 | -0.225 | -0.5880 | No | ||
| 17 | CASP2 | 1448165_at | 17783 | -0.314 | -0.6236 | No | ||
| 18 | BAG4 | 1418707_at 1439024_at 1449186_at | 18238 | -0.372 | -0.6341 | No | ||
| 19 | CASP9 | 1426125_a_at 1437537_at 1457816_at | 19589 | -0.638 | -0.6783 | Yes | ||
| 20 | RELA | 1419536_a_at | 19605 | -0.642 | -0.6614 | Yes | ||
| 21 | FADD | 1416888_at 1446499_at | 19759 | -0.682 | -0.6497 | Yes | ||
| 22 | DFFB | 1421229_at 1437051_at | 19874 | -0.719 | -0.6352 | Yes | ||
| 23 | APAF1 | 1450223_at | 19951 | -0.745 | -0.6182 | Yes | ||
| 24 | FAS | 1460251_at | 19987 | -0.757 | -0.5990 | Yes | ||
| 25 | MAP3K14 | 1422999_at 1434364_at | 20042 | -0.774 | -0.5803 | Yes | ||
| 26 | TRAF2 | 1451233_at | 20231 | -0.852 | -0.5655 | Yes | ||
| 27 | TRAF1 | 1423602_at 1445452_at | 20906 | -1.270 | -0.5615 | Yes | ||
| 28 | CFLAR | 1424996_at 1425686_at 1425687_at 1439600_at 1449317_at | 21176 | -1.546 | -0.5314 | Yes | ||
| 29 | TNFRSF1A | 1417291_at | 21491 | -2.031 | -0.4901 | Yes | ||
| 30 | CASP7 | 1426062_a_at 1448659_at | 21729 | -2.723 | -0.4263 | Yes | ||
| 31 | MAP2K7 | 1421416_at 1425393_a_at 1425512_at 1425513_at 1440442_at 1451736_a_at 1457182_at | 21823 | -3.268 | -0.3410 | Yes | ||
| 32 | CASP6 | 1415995_at 1458715_at | 21833 | -3.326 | -0.2502 | Yes | ||
| 33 | DFFA | 1450885_at 1457564_at | 21853 | -3.597 | -0.1525 | Yes | ||
| 34 | CD247 | 1420716_at 1426079_at 1426396_at 1428059_at 1428060_at 1438392_at 1452539_a_at | 21921 | -5.699 | 0.0006 | Yes |
